Eurofins Biomnis code

PAN

Synonyms

• companion
• NGS
• oncology
• solid tumor
• targeted therapy

Specialty

Genetics

Preanalytics

• Tumoral block included in paraffin or slides (6 slides 5µm) or DNA extract
•   Ambient temperature

• A tube specifically for this analysis : No

Further information

Use the specific request form B9-INTGB: Oncology-Solid tumors
The use of the S25UK transport bag is Mandatory.
Attach the anatomopathological report

Specific equipment available

• S25 : Envelope Genetics and Molecular Oncology

Documents to download

• Specific form (B9-INTGB)
• Management of solid tumours in biopathology(DS5-INTGB)
• Pulmonology Panel form (DS83-INTGB)
• Digestive system Panel form (DS84-INTGB)
• Gynaecology Panel (DS85-INTGB)
• Other solid tumours (DS86-INTGB)

Methodology

Targeted sequencing of cancer genes (NGS) : -Library : AmpliSeq Library PLUS for Illumina Custom Panel V1 - Amplicon-based targeted library preparation method -NGS Platform : MiSeq Illumina - Flowcell : microV2 (2x150pb) - Paired-end reads -Analysis software : Miseq control Software version 2.6.2.1 /SeqOne Platform v1.2 - CE Pipeline version : SomaVar v1.4 CE -Limit of detection : 5% -Minimum depth accepted : 500x -Human genome version : Hg19

Turnaround time

10 business days