We are specialises in the study and detection of infectious diseases and our laboratories are dedicated to 4 different sectors. We have a Class 3 mycobacteriology laboratory, a microbiology lab for the study of bacterial and viral cultures as well as parasitology, and 2 labs dedicated to the study of molecular biology for the diagnosis of infectious diseases as well as general serology.
Ours expertises :
State-of-the-art technologies are essential to this department and enable us to quickly adapt to the latest, ever-changing methods for the diagnosis of infectious diseases, epidemics, emergence of new pathogenic agents, and resistance to drugs used to fight various infectious diseases.
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D43-INTGB Declaration of medical consultation and patient consent form for genetic testing.
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D44-INTGB Information and consent for pregnant women / Information and consent prior to the carrying out of genetic examinations of an individual
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K13P-INTGB - Whooping cough diagnosis
by PCR - Sample kit (Nasopharyngeal Swab)
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R10-INTGB - Pregnancy Monitoring Form
Patients undergoing amniocentesis for the
screening of infectious or parasitic agents
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R28-INTGB - Clinical Information Form Dengue / Chikungunya / West Nile / Zika
Publication
Characterization of Samples Identified as Hepatitis C Virus Genotype 1 without Subtype by Abbott RealTime HCV Genotype II Assay Using the New Abbott HCV Genotype Plus RUO Test
Mokhtari C, Ebel A, Reinhardt B, Merlin S, Proust S, Roque-Afonso AM
J Clin Microbiol 2016 ; 54:296-299
Publication
Chronic hepatitis E in absence of severe immune deficiency
Colson P, Schleinitz N, Vely F, Poveda JD, Jacomo V, Demerle C, Borentain P, Gerolami R.Colson P, et al.
Clin Res Hepatol Gastroenterol. 2020 Feb;44(1):e1-e4. doi: 10.1016/j.clinre.2019.06.015.
Epub 2019 Jul 18 - PMID: 31327621
Publication
Combined Genotypic, Phylogenetic, and Epidemiologic Analyses of Mycobacterium tuberculosis Genetic Diversity in the Rhône Alpes Region, France
Pichat C, Couvin D, Carret G, Frédénucci I, Jacomo V, Carricajo A, Boisset S, Dumitrescu O, Flandrois JP, LinaG, Rastogin N
Plos One 2016
Publication
Comparative performance of three rapid HBsAg assays for detection of HBs diagnostic escape mutants in clinical samples
Servant-Delmas A, Ly TD, Hamon C, Kassim Houdah A, Laperche S
J Clin Microbiol 2015 ; 53:3954-3955
Publication
Early assessment of diffusion and possible expansion of SARS-CoV-2 Lineage 20I/501Y.V1 (B.1.1.7, variant of concern 202012/01) in France
Alexandre Gaymard, Paolo Bosetti, Adeline Feri, Gregory Destras, Vincent Enouf, Alessio Andronico, Sonia Burrel, Sylvie Behillil, Claire Sauvage, Antonin Bal, Florence Morfin, Sylvie Van Der Werf, Laurence Josset, ANRS MIE AC43 COVID-198, French viro COVID group (including Catherine Coignard), François Blanquart, Bruno Coignard, Simon Cauchemez, Bruno Lina
Eurosurveillance 04/03/2021 - Volume 26, Issue 9
Publication
Émergence de la leptospirose humaine en France métropolitaine ? Actualités sur la surveillance
Bourhy P, Picardeau M, Septfons A, Trombert S, Cart-Tanneur E
Med Mal Infect 2017 ; 47 (4s):s150
Publication
Evaluation of the performance of a new automated HIV combination assay
Ghisetti V, Coignard C, Allice T, Ly TD
J Clin Virol 2017 ; 96:80-83
Publication
Evaluation of the SLOMYCO Sensititre® panel for testing the antimicrobial susceptibility of Mycobacterium marinum isolates
Chazel M, Marchandin H, Keck N, Terru D, Carrière C, Ponsoda M, Jacomo V, Panteix G, Bouzinbi N, Bañuls AL, Choisy M, Solassol J, Aubry, Godreuil S
Ann Clin Microbiol Antimicrob 2016 ; 15:30
Publication
Impact of antifungal prescription on relative distribution and susceptibility of Candida spp. Trends over 10 years
Bailly S, Maubon D, Fournier P, Pelloux H, Schwebel C, Chapuis C, Foroni L, Cornet M, Timsit JF
J Infect 2015 ; Oct 28. pii: S0163-4453(15)00342-4. doi: 10.1016/j.jinf.2015.09.041
Publication
Incertitude de mesure et sérologie infectieuse. Question : Comment appliquer lincertitude de mesure dans la pratique courante de la sérologie des maladies infectieuses ?
Ly TD, Coignard C
Feuillets de Biologie 2016 ; 332:51-55
Publication
Large outbreak of urogenital schistosomiasis acquired in Southern Corsica: monitoring the early signs of the endemicization?
Noël H, Ruello M, Maccary A, Pellat C, Sommen C, Boissier J, Barré-Cardi H, Fillaux J, Termignon JL, Debruyne M, Chyderiotis G, Durand J, Ramalli L, Chiappini JD , Malfait P, Berry
Clin Microbiol Infect 2017 ; pii: S1198-743X(17)30350-6. doi: 10.1016/j.cmi
Publication
Performance of HBsAg quantification assays for detection of Hepatitis B virus genotypes and diagnostic escape-variants in clinical samples
Thibault V, Servant-Delmas A, Ly TD, Roque-Afonso AM, Laperche S
J Clin Virol 2017 ; 89:14-21
Publication
Persistence of Zika virus in gradient sperm preparation
Cassuto NG, Marras G, Jacomo V, Bouret D
J Gynecol Obstet Hum Reprod 2018, pii: S2468-7847(18)30038-2
Publication
Preliminary report of an autochthonous Chikungunya outbreak in France, July to September 2017
Calba C, Guerbois-Galla M, Franke F, Jeannin C, Auzet-Caillaud M, Grard G, Pigaglio L, Decoppet A, Weicherding J, Savaill MC, Munoz-Riviero M, Chaud P, Cadiou B, Ramalli L, Fournier P, Noel H, De Lamballerie X, Paty MC, Leparc-Goffart I
Euro Surveill 2017 ; 22(39):pii=17-00647
Publication
Prevalence of SARS-CoV-2 antibodies in France: results from nationwide serological surveillance
Stéphane Le Vu, Gabrielle Jones, François Anna, Thierry Rose, Jean-Baptiste Richard, Sibylle Bernard-Stoecklin, Sophie Goyard, Caroline Demeret, Olivier Helynck, Nicolas Escriou, Marion Gransagne, Stéphane Petres, Corinne Robin, Virgile Monnet, Louise Perrin de Facci, Marie-Noelle Ungeheuer, Lucie Léon, Yvonnick Guillois, Laurent Filleul, Pierre Charneau, Daniel Lévy-Bruhl, Sylvie van der Werf & Harold Noel
Nature Communications volume 21/05/2021 12, Article number: 3025 (2021)
Publication
Prospective Whole-Genome Sequencing in Tuberculosis Outbreak Investigation, France, 2017-2018
Genestet C, Tatai C, Berland JL, Claude JB, Westeel E, Hodille E, Fredenucci I, Rasigade JP, Ponsoda M, Jacomo V, Vachée A, Gaudart A, Gaillard JL, Roux AL, Ader F, Tararbit K, Terpant G, Bryant JE, Lina G, Dumitrescu O; Lyon TB Study Group.Genestet C, et al.
Emerg Infect Dis. 2019 Mar;25(3):589-592. doi: 10.3201/eid2503.181124 - PMID: 30789329
Publication
Routine survey of Mycobacterium tuberculosis isolates reveals nosocomial transmission.
Genestet C, Paret R, Pichat C, Berland JL, Jacomo V, Carret G, Fredenucci I, Hodille E, Rasigade JP, Boisset S, Carricajo A, Lina G, Ronnaux-Baron AS, Mornex JF, Grando J, Sénéchal A, Ader F, Dumitrescu O; Lyon TB study group.Genestet C, et al.
Eur Respir J. 2020 Mar 20;55(3):1901888. doi: 10.1183/13993003.01888-2019. Print 2020 Mar
Publication
Surveillance des infections humaines par hantavirus en France métropolitaine, 2012-2016
Reynes JM, Carli D, Renaudin B, Fizet A, Bour JB, Brodard V, Cart-Tanneur E, Dewilde A, El Hamri M, Fleury H, Hecquet D, Jeulin H, Lechat S, Lemarquand-Bardini M, Lepiller Q, Poveda JD, Raulin O, Twizeyimana E, Van Cauteren D, Velay A, Septfons A, Baize S
BEH 2017 ; 23:492-499
Publication
Surveillance du chikungunya et de la dengue en France métropolitaine, 2014
Septfons A, Noël H, Leparc-Goffart I, Giron S, Delisle E, Chappert JL, Catelinois O, Franke F, Servas V, Guinard A, Debruyne M, Schaal O, Brichler S, Ninove L, Prat C, Flusin O, Poujol I, Letort MJ, Deniau J, Six C, Rousseau C, De Valk H, Paty MC
Les Feuillets de Biologie 2016 ; 330:70-77
Publication
Surveillance du chikungunya, de la dengue et des infections à virus Zika en France métropolitaine, 2017
Fournet N, Franke F, Chaud P, Raguenaud ME, Calba C, Septfons A, Cart-Tanneur E. et al.
Bull Epidémiol Hebd. 2018;(24):494-503.
Publication
The ROMANOV study found impaired humoral and cellular immune responses to SARS-CoV-2 mRNA vaccine in virus-unexposed patients receiving maintenance hemodialysis
Maxime Espi, Xavier Charmetant, Thomas Barba, Laetitia Koppe, Caroline Pelletier, Emilie Kalbacher, Elodie Chalencon, Virginie Mathias, Anne Ovize, Emmanuelle Cart-Tanneur, Christine Bouz, Laurence Pellegrina, Emmanuel Morelon, Denis Fouque, Laurent Juillard, Olivier Thaunat
Kidney International 2021 Oct;100(4):928-936. doi: 10.1016/j.kint.2021.07.005.
Publication
Vector-borne Transmission of Zika Virus in Europe, Southern France, August 2019
Sandra Giron, Florian Franke, Anne Decoppet, Bernard Cadiou, Thierry Travaglini, Laurence Thirion, Guillaume Durand, Charles Jeannin, Grégory LAmbert, Gilda Grard, Harold Noël, Nelly Fournet, Michelle Auzet-Caillaud, Christine Zandotti, Samer Aboukaïs, Pascal Chaud, Saby Guedj, Lakri Hamouda, Xavier Naudot, Anne Ovize, Clément Lazarus, Henriette de Valk, Marie-Claire Paty, Isabelle Leparc-Goffart
Euro Surveill. 2019 Nov;24(45):1900655.
